Western Blot:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Purification:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Recombinant:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Mass Spectrometry:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Immunoprecipitation:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Binding Assay:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Expressing:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Variant Assay:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Over Expression:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Transfection:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Plasmid Preparation:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Construct:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Injection:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Immunofluorescence:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Incubation:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Derivative Assay:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Cell Culture:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Labeling:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Software:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Dominant Negative Mutation:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Mutagenesis:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Activation Assay:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Standard Deviation:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
BrdU Incorporation Assay:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Immunostaining:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
BrdU Staining:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Staining:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Fluorescence:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Microscopy:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Infection:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Cotransfection:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Blocking Assay:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
Activity Assay:Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: The following primary antibodies were used: mouse anti-HA (cat. no. 11583816001, Roche), mouse anti-Flag M2 (cat. no. F3165, clone M2; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-myc derived from hybridoma MYC1-9E10.2 (cat. no. CRL-1729, ATCC), mouse anti-phosphotyrosine (clone 4G10, cat. no. 05–321, Millipore, Kankakee, IL, USA), and mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA); mouse anti-EphA4 (cat. no. sc-365503), rabbit anti-PDGFRβ (cat. no. sc-432), mouse anti-PDGFRβ (cat. no. sc-374573), rabbit anti-FGFR1 (cat. no. sc-121), mouse anti-GFP (cat. no. sc-9996), rabbit anti-GAPDH (cat. no. sc-25778), and rabbit anti-FRS2a (cat. no. sc-8318) were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA; rabbit anti-phosph-p44/42 mitogen activated protein kinase (MAPK; ERK; Thr202/Tyr204; cat. no. 9101), rabbit anti-p44/42 MAPK (ERK; cat. no. 9102), and rabbit anti-FRS2α (Y196; cat. no. 3861) were purchased from Cell Signaling Technology, Danvers, MA, USA.
Article Title: Aberrant miR-339-5p/neuronatin signaling causes prodromal neuronal calcium dyshomeostasis in mutant presenilin mice
Article Snippet: For primary antibodies, we used rabbit anti-Nnat (1:1000, Abcam, catalog ab27266), mouse anti-SLC4A8/SLC4A10 (1:1000, Invitrogen, catalog PA5-101904), mouse anti-EphA4 (1:1000, Invitrogen, catalog 37-1600), mouse anti-BACE1 (1:1000, Thermo Fisher, catalog MA1-177), rabbit anti-BCL6 (1:1000, Invitrogen, catalog PA5-27390), mouse anti HAP1 (1:1000, Invitrogen, catalog MA1-46412), mouse anti-GAPDH (1:3000, Invitrogen, catalog MA5-15738-D680), rabbit anti-BiP/GRP78 (1:1000, ABclonal, catalog AB2757054), rabbit anti-PSD95 (1:1000, Cell Signaling Technology, catalog 3450), rabbit anti-CaMKII (1:1000, Cell Signaling Technology, catalog 3362), and rabbit anti-phospho-CaMKII (1:1000, Cell Signaling Technology, catalog 12716).
Article Title: Impaired Spatial Memory in Mice Lacking CD3ζ Is Associated with Altered NMDA and AMPA Receptors Signaling Independent of T-Cell Deficiency
Article Snippet: The primary antibodies used in this study were as follows: mouse anti-EphA4 (1 μg/ml; Invitrogen), rabbit anti-CD3ζ (0.5 μg/ml; Spring Bioscience), mouse anti-PSD95 (1 μg/ml; Abcam), mouse anti-GluN1 (1 μg/ml; BD Pharmingen), rabbit anti-GluN2A (2 μg/ml; Millipore), mouse anti-GluN2B (2 μg/ml; NeuroMab), rabbit anti-GluA1 (5 μg/ml; Calbiochem), rabbit anti-Phospho831 GluA1 (Millipore), rabbit anti-Phospho286 CaMKII (1:200; Promega), mouse anti-CaMKIIα (0.5 μg/ml; Thermo Scientific), or mouse anti-GAPDH (0.2 μg/ml; Santa Cruz Biotechnologies).
Article Title: The Interaction of EphA4 With PDGFRβ Regulates Proliferation and Neuronal Differentiation of Neural Progenitor Cells in vitro and Promotes Neurogenesis in vivo
Article Snippet: For immunofluorescence analysis, NPCs were fixed with 4% paraformaldehyde at room temperature for 1 h and blocked in 1% normal goat serum (Sigma–Aldrich, St. Louis, MO, USA) at room temperature for 1 h. The cells were then incubated with mouse anti-Tuj1 antibody (cat. no. T8660; Sigma–Aldrich, St. Louis, MO, USA), mouse anti-Nestin (cat. no. ab22035; Abcam, Cambridge, UK), rabbit anti-Ki67 (cat. no. ab16667, Abcam, Cambridge, UK), rabbit anti-GFAP (cat. no. Z0334, Dako), mouse anti-EphA4 (cat. no. 37–1,600, Thermo Fisher Scientific, Waltham, MA, USA), and rabbit anti-PDGFRβ (cat. no. sc-432) at 4°C overnight, followed by incubation with the secondary antibodies, goat anti-mouse Alexa Flour 488 (cat. no. 115-545-146; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) and goat anti-rabbit cyanine Cy3-conjugated IgG (cat. no. 711-165-152; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) for 2 h at room temperature in the dark.
Article Title: Plasmin-mediated cleavage of EphA4 at central amygdala inhibitory synapses controls anxiety
Article Snippet: Samples were then probed with the following primary antibodies: mouse anti-EphA4, (Invitrogen, USA, 1:500), anti-GFP antibody (Santa Cruz Biotechnology Inc., USA, 1:500) at 4°C overnight with gentle agitation.
Article Title: EphA4 Regulates Neuroblast and Astrocyte Organization in a Neurogenic Niche
Article Snippet: Tissue sections were incubated overnight at 4°C with primary antibodies prepared in blocking solution using the following concentrations: goat anti-doublecortin (Dcx) 1:200 (Santa Cruz Biotechnology, RRID: AB_2088494), guinea pig anti-Dcx 1:1000 (Millipore, RRID: AB_1586992), rabbit anti-Dcx 1:200 (Santa Cruz Biotechnology, AB_2088488), rabbit anti-GFAP 1:1000 (DAKO, RRID: AB_10013382), mouse anti-GFAP 1:400 (Millipore, RRID: AB_2109815), rat anti-GFAP clone 2.2B10 1:250 (Thermo Fisher Scientific, RRID: AB_86543), goat antiPECAM-1 1:50 (Santa Cruz Biotechnology, RRID: 632174), rabbit antiEphA4 1:50 (Abcam, RRID: AB_304857), rat anti-EphA4 (Abcam, RRID: AB_2099346), mouse anti-EphA4 1:50 (Thermo Fisher Scientific, RRID: AB_2533301), goat anti-EphA4 1:20 (R&D Systems, AB_2099371), rabbit anti-ephrinA2 1:50 (Santa Cruz Biotechnology, RRID: AB_631409), rabbit anti-ephrinA3 1:50 (Santa Cruz Biotechnology, RRID: AB_2097777), rabbit anti-ephrinA5 1:50 (Santa Cruz Biotechnology, RRID: AB_2097911), or rabbit anti-ephrinB1/2/3 1:50 (Santa Cruz Biotechnology, RRID: AB_631413).
Article Title: Cell type-specific Nogo-A gene ablation promotes axonal regeneration in the injured adult optic nerve
Article Snippet: Primary antibodies were rabbit anti-Nogo-A/B (Bianca, Rb140) serum (1 : 20 000), mouse anti-L-MAG serum (1 : 1 000, polyclonal), 59 mouse anti-EphA4 (1 : 200, Invitrogen, Zug, Switzerland), rabbit anti-EphrinA3 (1 : 200, Invitrogen), mouse anti-S1PR2 (1 : 500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-phospho-STAT3 (1 : 500, Cell Signaling), rabbit anti-STAT3 (1 : 500, Cell Signaling), rabbit anti-phospho-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-ERK1/2 (1 : 1000, Cell Signaling), rabbit anti-phospho-AKT (1 : 500, Cell Signaling), rabbit anti-AKT (1 : 500, Cell Signaling), rabbit anti-phospho-CREB (1 : 500, Cell Signaling), rabbit anti-CREB (1 : 500, Cell Signaling), rabbit anti-phospho-Cofilin (1 : 500, Abcam), rabbit anti-Cofilin (1 : 500, Cell Signaling), and mouse anti-glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (1 : 20 000; Abcam).
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